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Breadcrumb Research A-Z researchers Rory Maizels Affiliated Researcher Briscoe lab Developmental Dynamics Laboratory Email Address: Crick email Email Year published 2026 (1) 2025 (1) 2024 (7) 2023 (1) 2021 (1) Facet Year published Research topics Chemical Biology & High Throughput (1) Computational & Systems Biology (4) Developmental Biology (3) Gene Expression (4) Genetics & Genomics (1) Genome Integrity & Repair (1) Model Organisms (3) Neurosciences (3) Signalling & Oncogenes (3) Synthetic Biology (3) Tumour Biology (1) Facet Research topics Crick Pre-Crick Crick publications (11) Facet Crick Pre-Crick Publication type Dataset (2) Journal article (5) Method (1) Preprint (1) Primary research (2) Review (2) Software (3) Facet Publication type Journal BioRxiv (1) Cell systems (1) Development (1) mBio (5) Nature Reviews Genetics (1) Philosophical Transactions of the Royal Society B: Biological Sciences (1) STAR Protocols (1) Facet Journal Displaying 1 - 11 of 11Last updated : 10 August 2026 02:00 Gene regulatory networks: from correlative models to causal explanations Authors (2) Rory Maizels James Briscoe Nature Reviews Genetics Published 1 June 2026 Crick labs James Briscoe Full details Dynamic landscape analysis of cell fate decisions: Predictive models of neural development from single-cell data Preprint Authors (7) Marine Fontaine M Joaquina Delas Meritxell Saez Rory Maizels Elizabeth Finnie James Briscoe David A Rand bioRxiv Published 28 May 2025 Crick labs/ facilities James Briscoe Flow Cytometry Full details A protocol for time-resolved transcriptomics through metabolic labeling and combinatorial indexing Authors (3) Rory Maizels Daniel Snell James Briscoe STAR Protocols Published 20 December 2024 Crick labs/ facilities James Briscoe Genomics Structural Biology Flow Cytometry Full details Reconstructing developmental trajectories using latent dynamical systems and time-resolved transcriptomics Authors (3) Rory Maizels Daniel Snell James Briscoe Cell systems Published 15 May 2024 Crick labs/ facilities James Briscoe Genomics Structural Biology Flow Cytometry Full details Bulk RNA-seq data for Maizels et al 2024 Authors (1) Rory Maizels Zenodo Published 22 March 2024 Crick labs/ facilities James Briscoe Genomics Structural Biology Flow Cytometry Full details Zenodo deposit: rorymaizels/Maizels2023aa: 0.1 Authors (1) Rory Maizels Zenodo Published 13 March 2024 Crick labs/ facilities James Briscoe Genomics Structural Biology Flow Cytometry Full details Zenodo deposit: rorymaizels/sciFATE2_processing: 0.1 Authors (1) Rory Maizels Zenodo Published 13 March 2024 Crick labs/ facilities James Briscoe Genomics Structural Biology Flow Cytometry Full details Zenodo deposit: rorymaizels/velvetVAE: Initial release Authors (1) Rory Maizels Zenodo Published 13 March 2024 Crick labs/ facilities James Briscoe Genomics Structural Biology Flow Cytometry Full details A dynamical perspective: moving towards mechanism in single-cell transcriptomics Authors (1) Rory Maizels Philosophical Transactions of the Royal Society B: Biological Sciences Published 22 April 2024 Crick labs James Briscoe Full details GEO entry GSE236520: Deep dynamical modelling of developmental trajectories with temporal transcriptomics Authors (1) Rory Maizels Gene Expression Omnibus (GEO) Published 6 July 2023 Crick labs James Briscoe Full details Single cell transcriptome profiling of the human developing spinal cord reveals a conserved genetic programme with human specific features Authors (4) Teresa Rayon Alonso Rory Maizels Christopher Barrington James Briscoe Development Published 16 July 2021 Crick labs/ facilities James Briscoe Bioinformatics and Biostatistics Scientific computing Genomics Experimental Histopathology Full details
Gene regulatory networks: from correlative models to causal explanations Authors (2) Rory Maizels James Briscoe Nature Reviews Genetics Published 1 June 2026 Crick labs James Briscoe Full details
Dynamic landscape analysis of cell fate decisions: Predictive models of neural development from single-cell data Preprint Authors (7) Marine Fontaine M Joaquina Delas Meritxell Saez Rory Maizels Elizabeth Finnie James Briscoe David A Rand bioRxiv Published 28 May 2025 Crick labs/ facilities James Briscoe Flow Cytometry Full details
A protocol for time-resolved transcriptomics through metabolic labeling and combinatorial indexing Authors (3) Rory Maizels Daniel Snell James Briscoe STAR Protocols Published 20 December 2024 Crick labs/ facilities James Briscoe Genomics Structural Biology Flow Cytometry Full details
Reconstructing developmental trajectories using latent dynamical systems and time-resolved transcriptomics Authors (3) Rory Maizels Daniel Snell James Briscoe Cell systems Published 15 May 2024 Crick labs/ facilities James Briscoe Genomics Structural Biology Flow Cytometry Full details
Bulk RNA-seq data for Maizels et al 2024 Authors (1) Rory Maizels Zenodo Published 22 March 2024 Crick labs/ facilities James Briscoe Genomics Structural Biology Flow Cytometry Full details
Zenodo deposit: rorymaizels/Maizels2023aa: 0.1 Authors (1) Rory Maizels Zenodo Published 13 March 2024 Crick labs/ facilities James Briscoe Genomics Structural Biology Flow Cytometry Full details
Zenodo deposit: rorymaizels/sciFATE2_processing: 0.1 Authors (1) Rory Maizels Zenodo Published 13 March 2024 Crick labs/ facilities James Briscoe Genomics Structural Biology Flow Cytometry Full details
Zenodo deposit: rorymaizels/velvetVAE: Initial release Authors (1) Rory Maizels Zenodo Published 13 March 2024 Crick labs/ facilities James Briscoe Genomics Structural Biology Flow Cytometry Full details
A dynamical perspective: moving towards mechanism in single-cell transcriptomics Authors (1) Rory Maizels Philosophical Transactions of the Royal Society B: Biological Sciences Published 22 April 2024 Crick labs James Briscoe Full details
GEO entry GSE236520: Deep dynamical modelling of developmental trajectories with temporal transcriptomics Authors (1) Rory Maizels Gene Expression Omnibus (GEO) Published 6 July 2023 Crick labs James Briscoe Full details
Single cell transcriptome profiling of the human developing spinal cord reveals a conserved genetic programme with human specific features Authors (4) Teresa Rayon Alonso Rory Maizels Christopher Barrington James Briscoe Development Published 16 July 2021 Crick labs/ facilities James Briscoe Bioinformatics and Biostatistics Scientific computing Genomics Experimental Histopathology Full details