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Breadcrumb Jernej Ule Ule lab RNA Networks Laboratory : Publications Lab contentLab contentIn this section Overview Areas of interest Publications Members Vacancies Genes in the brain are very long and can be transcribed into diverse RNAs. Toggle to view hero caption PublicationsYear published2023 (1)2022 (1)2021 (1)2019 (2)2015 (1) Facet Year publishedResearch topicsBiochemistry & Proteomics (6)Computational & Systems Biology (6)Gene Expression (6)Genetics & Genomics (6)Neurosciences (6)Stem Cells (6)Tumour Biology (3) Facet Research topicsPublication typeJournal article (6)Primary research (6) Facet Publication typeJournal (-)Nucleic Acids Research (6) Facet Journal Publications Displaying 1 - 6 of 6Last updated : 20 April 2024 02:14 A computationally-enhanced hiCLIP atlas reveals Staufen1-RNA binding features and links 3' UTR structure to RNA metabolism Authors (5)Anob Chakrabarti Ira A IosubFlora LeeJernej UleNicholas Luscombe Nucleic Acids Research Published 8 May 2023 Crick labsJernej UleNicholas LuscombeFull details Identifying ribosome heterogeneity using ribosome profiling Authors (7) Ferhat AlkanOscar Wilkins Santiago Hernández-Pérez Sofia Ramalho Joana SilvaJernej Ule William J Faller Nucleic Acids Research Published 9 September 2022 Crick labsJernej UleFull details Chromatin-contact atlas reveals disorder-mediated protein interactions and moonlighting chromatin-associated RBPs Authors (7)Mahmoud-Reza RafieeJulian Zagalak Sviatoslav Sidorov Sebastian Steinhauser Karen DaveyJernej UleNicholas Luscombe Nucleic Acids Research Published 16 December 2021 Crick labsJernej UleNicholas LuscombeFull details FICC-Seq: a method for enzyme-specified profiling of methyl-5-uridine in cellular RNA Authors (7) Jean-Michel Carter Warren Emmett Igor RDL Mozos Annika Kotter Mark HelmJernej Ule Shobbir Hussain Nucleic Acids Research Published 4 November 2019 Crick labsJernej UleFull details Charting DENR-dependent translation reinitiation uncovers predictive uORF features and links to circadian timekeeping via Clock Authors (6) Violeta Castelo-Szekely Mara De Matos Marina Tusup Steve PascoloJernej Ule David Gatfield Nucleic Acids Research Published 4 June 2019 Crick labsJernej UleFull details Intergenic Alu exonisation facilitates the evolution of tissue-specific transcript ends Authors (8) Mojca Tajnik Alessandra Vigilante Simon Braun Heike HänelNicholas LuscombeJernej Ule Kathi Zarnack Julian König Nucleic Acids Research Published 2 December 2015 Crick labsJernej UleNicholas LuscombeFull details Share the page Share on Twitter Share on Facebook Share on LinkedIn Share on Email
A computationally-enhanced hiCLIP atlas reveals Staufen1-RNA binding features and links 3' UTR structure to RNA metabolism Authors (5)Anob Chakrabarti Ira A IosubFlora LeeJernej UleNicholas Luscombe Nucleic Acids Research Published 8 May 2023 Crick labsJernej UleNicholas LuscombeFull details
Identifying ribosome heterogeneity using ribosome profiling Authors (7) Ferhat AlkanOscar Wilkins Santiago Hernández-Pérez Sofia Ramalho Joana SilvaJernej Ule William J Faller Nucleic Acids Research Published 9 September 2022 Crick labsJernej UleFull details
Chromatin-contact atlas reveals disorder-mediated protein interactions and moonlighting chromatin-associated RBPs Authors (7)Mahmoud-Reza RafieeJulian Zagalak Sviatoslav Sidorov Sebastian Steinhauser Karen DaveyJernej UleNicholas Luscombe Nucleic Acids Research Published 16 December 2021 Crick labsJernej UleNicholas LuscombeFull details
FICC-Seq: a method for enzyme-specified profiling of methyl-5-uridine in cellular RNA Authors (7) Jean-Michel Carter Warren Emmett Igor RDL Mozos Annika Kotter Mark HelmJernej Ule Shobbir Hussain Nucleic Acids Research Published 4 November 2019 Crick labsJernej UleFull details
Charting DENR-dependent translation reinitiation uncovers predictive uORF features and links to circadian timekeeping via Clock Authors (6) Violeta Castelo-Szekely Mara De Matos Marina Tusup Steve PascoloJernej Ule David Gatfield Nucleic Acids Research Published 4 June 2019 Crick labsJernej UleFull details
Intergenic Alu exonisation facilitates the evolution of tissue-specific transcript ends Authors (8) Mojca Tajnik Alessandra Vigilante Simon Braun Heike HänelNicholas LuscombeJernej Ule Kathi Zarnack Julian König Nucleic Acids Research Published 2 December 2015 Crick labsJernej UleNicholas LuscombeFull details
