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Breadcrumb Jernej Ule Ule lab RNA Networks Laboratory : Publications Lab contentLab contentIn this section Overview Areas of interest Publications Members Vacancies Genes in the brain are very long and can be transcribed into diverse RNAs. Toggle to view hero caption PublicationsYear published (-)2019 (10) Facet Year publishedResearch topicsBiochemistry & Proteomics (10)Computational & Systems Biology (10)Gene Expression (10)Genetics & Genomics (10)Neurosciences (10)Stem Cells (10)Tumour Biology (2)Cell Biology (1) Facet Research topicsPublication typeJournal article (10)Primary research (7)Review (2)Commentary (1) Facet Publication typeJournalMolecular Cell (3)Nucleic Acids Research (2)BioEssays (1)Brain (1)Cell Reports (1)Nature Ecology & Evolution (1)Nature Structural and Molecular Biology (1) Facet Journal Publications Displaying 1 - 10 of 10Last updated : 19 April 2024 02:09 Alternative splicing regulatory networks: Functions, mechanisms, and evolution Authors (2)Jernej Ule Benjamin J Blencowe Molecular Cell Published 17 October 2019 Crick labsJernej UleFull details A systems view of spliceosomal assembly and branchpoints with iCLIP Authors (17) Michael Briese Nejc Haberman Christopher R SibleyRupert FarawayAndrea ElserAnob Chakrabarti[...] Luciano Saieva Livio Pellizzoni Christopher WJ Smith Tomaž CurkJernej Ule Nature Structural and Molecular Biology Published 30 September 2019 Crick labsJernej UleNicholas LuscombeFull details Widespread FUS mislocalization is a molecular hallmark of amyotrophic lateral sclerosis Authors (12)Giulia Tyzack Raphaelle LuisierDoaa TahaJacob NeevesMiha ModicJamie Mitchell[...] Linda Greensmith Jia NewcombeJernej UleNicholas LuscombeRickie Patani Brain Published 1 September 2019 Crick labsJernej UleRickie PataniNicholas LuscombeFull details FICC-Seq: a method for enzyme-specified profiling of methyl-5-uridine in cellular RNA Authors (7) Jean-Michel Carter Warren Emmett Igor RDL Mozos Annika Kotter Mark HelmJernej Ule Shobbir Hussain Nucleic Acids Research Published 4 November 2019 Crick labsJernej UleFull details The transcriptome-wide landscape and modalities of EJC binding in adult Drosophila Authors (5) Ales Obrdlik Gen Lin Nejc HabermanJernej Ule Anne Ephrussi Cell Reports Published 30 July 2019 Crick labsJernej UleFull details Cross-regulation between TDP-43 and paraspeckles promotes pluripotency-differentiation transition Authors (20)Miha Modic Markus Grosch Gregor Rot Silvia Schirge Tjasa Lepko Tomohiro Yamazaki[...] Alexander Meissner Heiko Lickert Tetsuro HiroseJernej Ule Micha Drukker Molecular Cell Published 6 June 2019 Crick labsJernej UleFull details Charting DENR-dependent translation reinitiation uncovers predictive uORF features and links to circadian timekeeping via Clock Authors (6) Violeta Castelo-Szekely Mara De Matos Marina Tusup Steve PascoloJernej Ule David Gatfield Nucleic Acids Research Published 4 June 2019 Crick labsJernej UleFull details The origin of neural microexons Authors (2) Rupert FarawayJernej Ule Nature Ecology & Evolution Published 4 March 2019 Crick labsJernej UleFull details P-TEFb activation by RBM7 shapes a pro-survival transcriptional response to genotoxic stress Authors (14) Andrii Bugai Alexandre JC Quaresma Caroline C Friedel Tina Lenasi Robert Düster Christopher R Sibley[...] Melanie Blasius Matthias GeyerJernej Ule Lars Dölken Matjaž Barborič Molecular Cell Published 18 April 2019 Crick labsJernej UleFull details Genomic accumulation of retrotransposons was facilitated by repressive RNA-binding proteins: A hypothesis Authors (2)Jan AttigJernej Ule BioEssays Published 1 February 2019 Crick labsJernej UleFull details Share the page Share on Twitter Share on Facebook Share on LinkedIn Share on Email
Alternative splicing regulatory networks: Functions, mechanisms, and evolution Authors (2)Jernej Ule Benjamin J Blencowe Molecular Cell Published 17 October 2019 Crick labsJernej UleFull details
A systems view of spliceosomal assembly and branchpoints with iCLIP Authors (17) Michael Briese Nejc Haberman Christopher R SibleyRupert FarawayAndrea ElserAnob Chakrabarti[...] Luciano Saieva Livio Pellizzoni Christopher WJ Smith Tomaž CurkJernej Ule Nature Structural and Molecular Biology Published 30 September 2019 Crick labsJernej UleNicholas LuscombeFull details
Widespread FUS mislocalization is a molecular hallmark of amyotrophic lateral sclerosis Authors (12)Giulia Tyzack Raphaelle LuisierDoaa TahaJacob NeevesMiha ModicJamie Mitchell[...] Linda Greensmith Jia NewcombeJernej UleNicholas LuscombeRickie Patani Brain Published 1 September 2019 Crick labsJernej UleRickie PataniNicholas LuscombeFull details
FICC-Seq: a method for enzyme-specified profiling of methyl-5-uridine in cellular RNA Authors (7) Jean-Michel Carter Warren Emmett Igor RDL Mozos Annika Kotter Mark HelmJernej Ule Shobbir Hussain Nucleic Acids Research Published 4 November 2019 Crick labsJernej UleFull details
The transcriptome-wide landscape and modalities of EJC binding in adult Drosophila Authors (5) Ales Obrdlik Gen Lin Nejc HabermanJernej Ule Anne Ephrussi Cell Reports Published 30 July 2019 Crick labsJernej UleFull details
Cross-regulation between TDP-43 and paraspeckles promotes pluripotency-differentiation transition Authors (20)Miha Modic Markus Grosch Gregor Rot Silvia Schirge Tjasa Lepko Tomohiro Yamazaki[...] Alexander Meissner Heiko Lickert Tetsuro HiroseJernej Ule Micha Drukker Molecular Cell Published 6 June 2019 Crick labsJernej UleFull details
Charting DENR-dependent translation reinitiation uncovers predictive uORF features and links to circadian timekeeping via Clock Authors (6) Violeta Castelo-Szekely Mara De Matos Marina Tusup Steve PascoloJernej Ule David Gatfield Nucleic Acids Research Published 4 June 2019 Crick labsJernej UleFull details
The origin of neural microexons Authors (2) Rupert FarawayJernej Ule Nature Ecology & Evolution Published 4 March 2019 Crick labsJernej UleFull details
P-TEFb activation by RBM7 shapes a pro-survival transcriptional response to genotoxic stress Authors (14) Andrii Bugai Alexandre JC Quaresma Caroline C Friedel Tina Lenasi Robert Düster Christopher R Sibley[...] Melanie Blasius Matthias GeyerJernej Ule Lars Dölken Matjaž Barborič Molecular Cell Published 18 April 2019 Crick labsJernej UleFull details
Genomic accumulation of retrotransposons was facilitated by repressive RNA-binding proteins: A hypothesis Authors (2)Jan AttigJernej Ule BioEssays Published 1 February 2019 Crick labsJernej UleFull details