Publications

Nomenclature for endogenous retrovirus (ERV) loci

Authors (9)

Robert J Gifford
Jonas Blomberg
John M Coffin
Hung Fan
Thierry Heidmann
Jens Mayer
Jonathan Stoye
Michael Tristem
Welkin E Johnson

Retrovirology

Published 28 August 2018

Crick labs

Jonathan Stoye

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Restoration of endogenous retrovirus infectivity impacts mouse cancer models

Authors (10)

Eleonora Ottina
Prisca Levy
Urszula Eksmond
Julia Merkenschlager
George Young
Juliette Roels
Jonathan Stoye
Thomas Tüting
Dinis Calado
George Kassiotis

Cancer Immunology Research

Published 1 November 2018

Crick labs/ facilities

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Ortervirales: new virus order unifying five families of reverse-transcribing viruses

Authors (30)

Mart Krupovic
Jonas Blomberg
John M Coffin
Indranil Dasgupta
Hung Fan
Andrew D Geering
[...]
Jonathan Stoye
Pierre-Yves Teycheney
Michael Tristem
Eugene V Koonin
Jens H Kuhn

Journal of Virology

Published 15 June 2018

Crick labs

Jonathan Stoye

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The axolotl genome and the evolution of key tissue formation regulators

Authors (19)

Sergej Nowoshilow
Siegfried Schloissnig
Ji-Feng Fei
Andreas Dahl
Andy WC Pang
Martin Pippel
[...]
Han Cao
Bianca Habermann
Michael Hiller
Elly M Tanaka
Eugene W Myers

Nature

Published 1 February 2018

Crick labs

Jonathan Stoye

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The genome of Schmidtea mediterranea and the evolution of core cellular mechanisms

Authors (13)

Markus Alexander Grohme
Siegfried Schloissnig
Andrei Rozanski
Martin Pippel
George Young
Sylke Winkler
[...]
Andreas Dahl
Sean Powell
Michael Hiller
Eugene Myers
Jochen Christian Rink

Nature

Published 1 February 2018

Crick labs

Jonathan Stoye

Full details

Physiological and pathological transcriptional activation of endogenous retroelements assessed by RNA-sequencing of B lymphocytes

Authors (4)

Frontiers in Microbiology

Published 12 December 2017

Crick labs/ facilities

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Making a virtue of necessity: the pleiotropic role of human endogenous retroviruses in cancer

Authors (2)

Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences

Published 19 October 2017

Crick labs

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HIV-1 infection of primary CD4+ T cells regulates the expression of specific human endogenous retrovirus HERV-K (HML-2) elements

Authors (11)

George Young
Sandra N Terry
Lara Manganaro
Alvaro Cuesta-Dominguez
Gintaras Deikus
Dabeiba Bernal-Rubio
Laura Campisi
Ana Fernandez-Sesma
Robert Sebra
Viviana Simon
Lubbertus CF Mulder

Journal of Virology

Published 1 January 2018

Crick labs

Jonathan Stoye

Full details

Mutation of the putative immunosuppressive domain of the retroviral envelope glycoprotein compromises infectivity

Authors (6)

Urszula Eksmond
Bryony Jenkins
Julia Merkenschlager
Walther Mothes
Jonathan Stoye
George Kassiotis

Journal of Virology

Published 1 November 2017

Crick labs/ facilities

Full details

A comparative analysis of the foamy and ortho virus capsid structures reveals an ancient domain duplication

Authors (3)

William R Taylor
Jonathan Stoye
Ian Taylor

BMC Structural Biology

Published 4 April 2017

Crick labs

Full details

SAMHD1 enhances nucleoside-analogue efficacy against HIV-1 in myeloid cells

Authors (9)

Scientific Reports

Published 21 February 2017

Crick labs/ facilities

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Eleventh International Foamy Virus Conference—meeting report

Authors (14)

Florence Buseyne
Antoine Gessain
Marcelo A Soares
André F Santos
Magdalena Materniak-Kornas
Pascale Lesage
[...]
Dirk Lindemann
Birgitta M Wöhrl
Jonathan Stoye
Ian Taylor
Arifa S Khan

Viruses

Published 23 November 2016

Crick labs

Full details

Structure of a spumaretrovirus gag central domain reveals an ancient retroviral capsid

Authors (15)

Neil J Ball
Giuseppe Nicastro
Moumita Dutta
Dominic J Pollard
David C Goldstone
Marta Sanz-Ramos
[...]
Dirk Lindemann
Jonathan Stoye
William R Taylor
Peter Rosenthal
Ian Taylor

PLOS Pathogens

Published 9 November 2016

Crick labs/ facilities

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Opposing development of cytotoxic and follicular helper CD4 T cells controlled by the TCF-1-Bcl6 nexus

Authors (12)

Tiziano Donnarumma
George Young
Julia Merkenschlager
Urszula Eksmond
Nadine Bongard
Stephen L Nutt
[...]
Ulf Dittmer
Vu Thuy Khanh Le-Trilling
Mirko Trilling
Wibke Bayer
George Kassiotis

Cell Reports

Published 1 November 2016

Crick labs/ facilities

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Dichotomy between T cell and B cell tolerance to neonatal retroviral infection permits T cell therapy

Authors (9)

Bettina Mavrommatis
Lucie Baudino
Prisca Levy
Julia Merkenschlager
Urszula Eksmond
Tiziano Donnarumma
George Young
Jonathan Stoye
George Kassiotis

Journal of Immunology

Published 1 November 2016

Crick labs/ facilities

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Expression levels of Fv1: effects on retroviral restriction specificities

Authors (4)

Wilson Li
Melvyn Yap
Vicky Voss
Jonathan Stoye

Retrovirology

Published 24 June 2016

Crick labs

Jonathan Stoye

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Immune responses to endogenous retroelements: taking the bad with the good

Authors (2)

Nature Reviews Immunology

Published 30 March 2016

Crick labs

Full details

Phospho-dependent regulation of SAMHD1 oligomerisation couples catalysis and restriction

Authors (15)

Laurence H Arnold
Harriet CT Groom
Simone Kunzelmann
David Schwefel
Sarah Caswell
Paula Ordonez Suarez
[...]
Steven A Howell
Jonathan Stoye
Michelle Webb
Ian Taylor
Kate Bishop

PLOS Pathogens

Published 2 October 2015

Crick labs/ facilities

Full details

Molecular determinants for recognition of divergent SAMHD1 proteins by the lentiviral accessory protein Vpx

Authors (7)

David Schwefel
Virginie C Boucherit
Evangelos Christodoulou
Philip Walker
Jonathan Stoye
Kate Bishop
Ian Taylor

Cell Host & Microbe

Published 8 April 2015

Crick labs/ facilities

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Mammalian endogenous retroviruses

Authors (2)

Dixie L Mager
Jonathan Stoye

Microbiology Spectrum

Published 1 February 2015

Crick labs

Jonathan Stoye

Full details

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Postdoctoral clinical fellows

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: Publications

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Publications

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Publication type

Journal

Nomenclature for endogenous retrovirus (ERV) loci

Restoration of endogenous retrovirus infectivity impacts mouse cancer models

Ortervirales: new virus order unifying five families of reverse-transcribing viruses

The axolotl genome and the evolution of key tissue formation regulators

The genome of Schmidtea mediterranea and the evolution of core cellular mechanisms

Physiological and pathological transcriptional activation of endogenous retroelements assessed by RNA-sequencing of B lymphocytes

Making a virtue of necessity: the pleiotropic role of human endogenous retroviruses in cancer

HIV-1 infection of primary CD4+ T cells regulates the expression of specific human endogenous retrovirus HERV-K (HML-2) elements

Mutation of the putative immunosuppressive domain of the retroviral envelope glycoprotein compromises infectivity

A comparative analysis of the foamy and ortho virus capsid structures reveals an ancient domain duplication

SAMHD1 enhances nucleoside-analogue efficacy against HIV-1 in myeloid cells

Eleventh International Foamy Virus Conference—meeting report

Structure of a spumaretrovirus gag central domain reveals an ancient retroviral capsid

Opposing development of cytotoxic and follicular helper CD4 T cells controlled by the TCF-1-Bcl6 nexus

Dichotomy between T cell and B cell tolerance to neonatal retroviral infection permits T cell therapy

Expression levels of Fv1: effects on retroviral restriction specificities

Immune responses to endogenous retroelements: taking the bad with the good

Phospho-dependent regulation of SAMHD1 oligomerisation couples catalysis and restriction

Molecular determinants for recognition of divergent SAMHD1 proteins by the lentiviral accessory protein Vpx

Mammalian endogenous retroviruses

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