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Breadcrumb Bioinformatics and Biostatistics Bioinformatics and Biostatistics : Publications Lab contentLab contentIn this section Overview Publications Members Bioinformatic visualisation of protein binding along a human chromosome, courtesy of Federico Agostini and Nick Luscombe. Toggle to view hero caption Publications Displaying 261 - 270 of 445Last updated : 25 April 2024 02:49 Transcriptomes of microglia in experimental cerebral malaria in mice in the presence and absence of Type I Interferon signaling Authors (5) Carlos Talavera-López Barbara Capuccini Richard Mitter Jing Wen Lin Jean Langhorne BMC Research Notes Published 20 December 2018 Crick labs/ facilitiesJean LanghorneBioinformatics and BiostatisticsFlow CytometryBiological Research FacilityAdvanced SequencingFull details Genomic landscape of oxidative DNA damage and repair reveals regioselective protection from mutagenesis Authors (3)Anna PoetschSimon BoultonNicholas Luscombe Genome Biology Published 7 December 2018 Crick labs/ facilitiesNicholas LuscombeSimon BoultonBioinformatics and BiostatisticsFull details Characterisation of the Toxoplasma gondii tyrosine transporter and its phosphorylation by the calcium-dependent protein kinase 3 Authors (7)Bethan WallbankCaia DominicusMalgorzata BroncelNathalie Legrave James I MacRae Henry M StainesMoritz Treeck Molecular Microbiology Published 1 May 2019 Crick labs/ facilitiesMoritz TreeckMetabolomicsProteomicsFlow CytometryBioinformatics and BiostatisticsAdvanced SequencingFull details The dynamics of TGF-β signaling are dictated by receptor trafficking via the ESCRT machinery Authors (9)Daniel MillerRobert BloxhamMing JiangIlaria Gori Rebecca E SaundersDebipriya Das Probir ChakravartyMichael HowellCaroline Hill Cell Reports Published 13 November 2018 Crick labs/ facilitiesCaroline HillHigh Throughput ScreeningBioinformatics and BiostatisticsLight MicroscopyFlow CytometryAdvanced SequencingFull details The γδTCR combines innate immunity with adaptive immunity by utilizing spatially distinct regions for agonist selection and antigen responsiveness Authors (16) Daisy Melandri Iva ZlatarevaRaphael Chaleil Robin J Dart Andrew Chancellor Oliver Nussbaumer[...] Susan John Salah MansourPaul Bates Pierre VantouroutAdrian Hayday Nature Immunology Published 12 November 2018 Crick labs/ facilitiesAdrian HaydayPaul BatesProteomicsFlow CytometryExperimental HistopathologyCell ServicesBiological Research FacilityBioinformatics and BiostatisticsAdvanced SequencingFull details Plasmodium-specific atypical memory B cells are short-lived activated B cells Authors (10)Damian Mazliah Peter J GardnerEdina Schweighoffer Sarah McLaughlinCaroline HoskingIrene Tumwine Randall S Davis Alexandre J PotocnikVictor Tybulewicz Jean Langhorne eLife Published 2 November 2018 Crick labs/ facilitiesVictor TybulewiczJean LanghorneFlow CytometryBiological Research FacilityBioinformatics and BiostatisticsAdvanced SequencingFull details c-Fos induces chondrogenic tumor formation in immortalized human mesenchymal progenitor cells Authors (13) Ander Abarrategi Stefano Gambera Arantzazu Alfranca Miguel A Rodriguez-Milla Raquel Perez-Tavarez Kevin Rouault-Pierre[...] Francisca Mulero César Trigueros Samuel NavarroDominique Bonnet Javier García-Castro Scientific Reports Published 23 October 2018 Crick labs/ facilitiesDominique BonnetBioinformatics and BiostatisticsIn Vivo ImagingFlow CytometryExperimental HistopathologyCell ServicesBiological Research FacilityFull details Nervous system regionalization entails axial allocation before neural differentiation Authors (12)Vicki Metzis Sebastian Steinhauser Edvinas Pakanavicius Mina GoutiDespina StamatakiKenzo Ivanovitch[...]Teresa Rayon Alonso S Neda Mousavy GharavyRobin Lovell-BadgeNicholas LuscombeJames Briscoe Cell Published 1 November 2018 Crick labs/ facilitiesJim SmithNicholas LuscombeRobin Lovell-BadgeJames BriscoeScientific computingLight MicroscopyFlow CytometryBiological Research FacilityBioinformatics and BiostatisticsAdvanced SequencingFull details α-actinin accounts for the bioactivity of actin preparations in inducing STAT target genes in Drosophila melanogaster Authors (19)Oliver GordonConor Henry Naren Srinivasan Susan Ahrens Anna Franz Safia Deddouche[...] Luis Teixeira Barry Thompson Marc S Dionne Will WoodCaetano Reis e Sousa eLife Published 27 September 2018 Crick labs/ facilitiesBarry ThompsonCaetano Reis e SousaStructural BiologyProteomicsBioinformatics and BiostatisticsAdvanced SequencingFull details The TAB1-p38α complex aggravates myocardial injury and can be targeted by small molecules Authors (15) Gian F De Nicola Rekha Bassi Charlie Nichols Mariana Fernandez-Caggiano Pelin Arabacilar Golforoush Dibesh Thapa[...] Adam Laing Jonathan P Hutchinson Philip Eaton James Clark Michael S Marber JCI insight Published 23 August 2018 Crick labs/ facilitiesBioinformatics and BiostatisticsFull details Pagination First page First Previous page Previous … Page 23 Page 24 Page 25 Page 26 Current page 27 Page 28 Page 29 Page 30 Page 31 … Next page Next Last page Last Share the page Share on Twitter Share on Facebook Share on LinkedIn Share on Email
Transcriptomes of microglia in experimental cerebral malaria in mice in the presence and absence of Type I Interferon signaling Authors (5) Carlos Talavera-López Barbara Capuccini Richard Mitter Jing Wen Lin Jean Langhorne BMC Research Notes Published 20 December 2018 Crick labs/ facilitiesJean LanghorneBioinformatics and BiostatisticsFlow CytometryBiological Research FacilityAdvanced SequencingFull details
Genomic landscape of oxidative DNA damage and repair reveals regioselective protection from mutagenesis Authors (3)Anna PoetschSimon BoultonNicholas Luscombe Genome Biology Published 7 December 2018 Crick labs/ facilitiesNicholas LuscombeSimon BoultonBioinformatics and BiostatisticsFull details
Characterisation of the Toxoplasma gondii tyrosine transporter and its phosphorylation by the calcium-dependent protein kinase 3 Authors (7)Bethan WallbankCaia DominicusMalgorzata BroncelNathalie Legrave James I MacRae Henry M StainesMoritz Treeck Molecular Microbiology Published 1 May 2019 Crick labs/ facilitiesMoritz TreeckMetabolomicsProteomicsFlow CytometryBioinformatics and BiostatisticsAdvanced SequencingFull details
The dynamics of TGF-β signaling are dictated by receptor trafficking via the ESCRT machinery Authors (9)Daniel MillerRobert BloxhamMing JiangIlaria Gori Rebecca E SaundersDebipriya Das Probir ChakravartyMichael HowellCaroline Hill Cell Reports Published 13 November 2018 Crick labs/ facilitiesCaroline HillHigh Throughput ScreeningBioinformatics and BiostatisticsLight MicroscopyFlow CytometryAdvanced SequencingFull details
The γδTCR combines innate immunity with adaptive immunity by utilizing spatially distinct regions for agonist selection and antigen responsiveness Authors (16) Daisy Melandri Iva ZlatarevaRaphael Chaleil Robin J Dart Andrew Chancellor Oliver Nussbaumer[...] Susan John Salah MansourPaul Bates Pierre VantouroutAdrian Hayday Nature Immunology Published 12 November 2018 Crick labs/ facilitiesAdrian HaydayPaul BatesProteomicsFlow CytometryExperimental HistopathologyCell ServicesBiological Research FacilityBioinformatics and BiostatisticsAdvanced SequencingFull details
Plasmodium-specific atypical memory B cells are short-lived activated B cells Authors (10)Damian Mazliah Peter J GardnerEdina Schweighoffer Sarah McLaughlinCaroline HoskingIrene Tumwine Randall S Davis Alexandre J PotocnikVictor Tybulewicz Jean Langhorne eLife Published 2 November 2018 Crick labs/ facilitiesVictor TybulewiczJean LanghorneFlow CytometryBiological Research FacilityBioinformatics and BiostatisticsAdvanced SequencingFull details
c-Fos induces chondrogenic tumor formation in immortalized human mesenchymal progenitor cells Authors (13) Ander Abarrategi Stefano Gambera Arantzazu Alfranca Miguel A Rodriguez-Milla Raquel Perez-Tavarez Kevin Rouault-Pierre[...] Francisca Mulero César Trigueros Samuel NavarroDominique Bonnet Javier García-Castro Scientific Reports Published 23 October 2018 Crick labs/ facilitiesDominique BonnetBioinformatics and BiostatisticsIn Vivo ImagingFlow CytometryExperimental HistopathologyCell ServicesBiological Research FacilityFull details
Nervous system regionalization entails axial allocation before neural differentiation Authors (12)Vicki Metzis Sebastian Steinhauser Edvinas Pakanavicius Mina GoutiDespina StamatakiKenzo Ivanovitch[...]Teresa Rayon Alonso S Neda Mousavy GharavyRobin Lovell-BadgeNicholas LuscombeJames Briscoe Cell Published 1 November 2018 Crick labs/ facilitiesJim SmithNicholas LuscombeRobin Lovell-BadgeJames BriscoeScientific computingLight MicroscopyFlow CytometryBiological Research FacilityBioinformatics and BiostatisticsAdvanced SequencingFull details
α-actinin accounts for the bioactivity of actin preparations in inducing STAT target genes in Drosophila melanogaster Authors (19)Oliver GordonConor Henry Naren Srinivasan Susan Ahrens Anna Franz Safia Deddouche[...] Luis Teixeira Barry Thompson Marc S Dionne Will WoodCaetano Reis e Sousa eLife Published 27 September 2018 Crick labs/ facilitiesBarry ThompsonCaetano Reis e SousaStructural BiologyProteomicsBioinformatics and BiostatisticsAdvanced SequencingFull details
The TAB1-p38α complex aggravates myocardial injury and can be targeted by small molecules Authors (15) Gian F De Nicola Rekha Bassi Charlie Nichols Mariana Fernandez-Caggiano Pelin Arabacilar Golforoush Dibesh Thapa[...] Adam Laing Jonathan P Hutchinson Philip Eaton James Clark Michael S Marber JCI insight Published 23 August 2018 Crick labs/ facilitiesBioinformatics and BiostatisticsFull details
